PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV97278
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 346aa    MW: 38997.9 Da    PI: 4.9719
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV97278genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.42.4e-10952144
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
              k i n+  r+ tf +R+  +l K +ELS LC  e+++ii+ ++g
  OIV97278  9 KHIANDAPRKSTFRQRKDVLLNKMQELSNLCKGEACLIIYDTDG 52
              6799************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MGRSRLTLKH IANDAPRKST FRQRKDVLLN KMQELSNLCK GEACLIIYDT DGGDPQPVTW  60
PAKLKTEHSL IRRYESEKNE EPPIMFGIQD YFNNKKEKVE ADISKVRKEI LKIKYPTSHP  120
CFNNLGDEQI RNFIAVLDAK GRACGERMNM LRLQQQLKVN SALTSSDALN SSEVNFMQNN  180
FQTHLIPTPL EPFDDSNHIA SSPLKHNMDS QPQMLHFDPN PLQLMANNTG MMDSANGIGS  240
PFDCATQVGS PNHVGVPPDL TIHSDPAIVS TNQLDEVDWD SLIDGLMDFG TLPHESVLYD  300
DFLGYQNVQQ QGAAFNTLTP LVDELQIPDY NNMVQADLFN HMNQDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.14e-13M-type_MADS family protein