PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV96774

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 165aa MW: 19056 Da PI: 10.0383

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96774	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.9	7.1e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skR+ngilKKA+E+ vLCda+v++iif+s+gk++ey+s OIV96774 9 KRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFGSSGKMHEYIS 59 79***********************************************86 PP
2	K-box	80	5.7e-27	71	139	1	69
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 y+k+sgk+l++ak+e+l++e++++kke+e++q e+Rhl+Ged++sL++keL+ Le++L+++l +R+kK OIV96774 71 YHKASGKRLWDAKHENLSNEIDRVKKENESMQIELRHLKGEDINSLNYKELMALEEALDHGLDGVREKK 139 7899****************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MGRGKIEIKR IENSSNRQVT YSKRKNGILK KAKEITVLCD AQVSLIIFGS SGKMHEYISP 60 STTLTDVLDR YHKASGKRLW DAKHENLSNE IDRVKKENES MQIELRHLKG EDINSLNYKE 120 LMALEEALDH GLDGVREKKL IKLIKPPSWK TYSKDKYIIH FINMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	2e-72	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIV96774