PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV96463

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 280aa MW: 30861.4 Da PI: 6.5799

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96463	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00026	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H OIV96463 104 FSCNYCKRKFYSSQALGGHQNAH 126 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
METLMSQEPY LCDNTTELPP IPITPLQNSQ ENKQHQSHEE QEAKKEGETD TLLDLNVPCD 60 DSSLECSPKL NLITCLDMDS ANTSSEENPP DPEGFDAAAE PRVFSCNYCK RKFYSSQALG 120 GHQNAHKRER SIAKRGQKLR THIMASAAAF GIPFLQGIAS LPLHGNRPLG IQAHSMVHNP 180 SQYFSSHIAG YGSNYGQHSW SRSRPVFYQQ PGIGKLAMET SHKTALSSRG SSVGRFEAVN 240 VRSSMLNSAV NEETSGYVFS GTPMKSNQDD MKLLDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	1e-44	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV96463