PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV96338

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 452aa MW: 48227.1 Da PI: 9.0256

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96338	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.4	6.1e-06	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OIV96338 63 FVCEICNKGFQREQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	15.2	6.3e-05	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k Hi+t+ OIV96338 139 WKCERCSKKYAVQSDWKAHIKTC 161 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MTETDNPLPS SMAASAEASF SSSPLNSASQ PPPKKKRNLP GMPDPDAEVI ALSPTTLMAT 60 NRFVCEICNK GFQREQNLQL HRRGHNLPWK LRQRSGNEVR KKVYVCPEPS CVHHHASRAL 120 GDLTGIKKHF SRKHGEKKWK CERCSKKYAV QSDWKAHIKT CGTKEYKCDC GTFFSRRDSF 180 VTHRAFCDAL AEEARAQTLT AVSKDGVVAS SPPPPPLTPS TSVLSPTLSI QSSEIPENPK 240 RMSPPPSNAV DTGNISIVMA SSTTPVPSSF SNLFSSISAQ ERTSLSLSTS SIFDSTSLFH 300 DPHHTTTATV ASPQPALSAT ALLQKAAQMG AASSNASLFH ALGLSTSSSN SGQDHITTLP 360 WNTLIHIKQE EINHTLPHNL GLGLTSGNSN AGFADAMMRS SSDPFGGPGQ PTMTRDLLGL 420 SIGNGTSIPS FFTSFGGNFQ ASGDRGGGGP GQ

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MTETDNPLPS SMAASAEASF SSSPLNSASQ PPPKKKRNLP GMPDPDAEVI ALSPTTLMAT  60
NRFVCEICNK GFQREQNLQL HRRGHNLPWK LRQRSGNEVR KKVYVCPEPS CVHHHASRAL  120
GDLTGIKKHF SRKHGEKKWK CERCSKKYAV QSDWKAHIKT CGTKEYKCDC GTFFSRRDSF  180
VTHRAFCDAL AEEARAQTLT AVSKDGVVAS SPPPPPLTPS TSVLSPTLSI QSSEIPENPK  240
RMSPPPSNAV DTGNISIVMA SSTTPVPSSF SNLFSSISAQ ERTSLSLSTS SIFDSTSLFH  300
DPHHTTTATV ASPQPALSAT ALLQKAAQMG AASSNASLFH ALGLSTSSSN SGQDHITTLP  360
WNTLIHIKQE EINHTLPHNL GLGLTSGNSN AGFADAMMRS SSDPFGGPGQ PTMTRDLLGL  420
SIGNGTSIPS FFTSFGGNFQ ASGDRGGGGP GQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	102	KLRQRSGNEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-109	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV96338