PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV96239

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 649aa MW: 73731 Da PI: 7.1545

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96239	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	5.1e-05	355	377	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + s Lk+H + H OIV96239 355 CSydGCGKTFIDASALKKHSNIH 377 77889**************9988 PP
2	zf-C2H2	14.2	0.00013	382	406	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk F ++s LkrH H OIV96239 382 FVCHykGCGKKFLDSSKLKRHFLIH 406 89*******************8877 PP
3	zf-C2H2	11.8	0.00073	412	437	1	23
EEET..TTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCg.ksFsrksnLkrHirtH 23 ++Cp Cg Fs nL++H++tH OIV96239 412 FVCPheGCGkVAFSLDFNLRSHMKTH 437 89*****999***********9 PP
4	zf-C2H2	15.4	5.5e-05	445	468	3	23
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 Cp dCgk++ + + L++Hi + H OIV96239 445 CPypDCGKRYAHEYKLRNHIASlH 468 8888****************9988 PP
5	zf-C2H2	12.5	0.00043	505	530	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+++ H OIV96239 505 YACPydGCQKAYIHEYKLKLHLKReH 530 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MSLKLWAKKS LIVIVNKEEV MELKGQCFLL NGFIFLGSIF LLNTLIIPAL WWILPHSSTF 60 YSFLRLSLIH LFYLLWFYPL YVFSIVLSTI WYNDIAKYGY AAMGTSNITA HKGETQNHPP 120 TLQNEHHVKR PSGLGGVMIG IGEQVYSILL LSVFFLEVYA TGFIPYIGKV LNFVLLSWMY 180 AYYCFEYKWN FNEVALDKRL DYFESYWAFF AGFGSPCVLA IFFFSPLVSY GIMAILFPLF 240 VLTATGSKAE QEISFEKDKR RDAGMERLPI FYVANKVSTN GIRCKTEKHN KTVLVNDSGI 300 IIDDWIPQDV VTTGGKCMLL RWVTEDTLKA LNEKEKEPSA PEPEPEPTTE VLFLCSYDGC 360 GKTFIDASAL KKHSNIHGER QFVCHYKGCG KKFLDSSKLK RHFLIHTGER HFVCPHEGCG 420 KVAFSLDFNL RSHMKTHSQE NYHLCPYPDC GKRYAHEYKL RNHIASLHEK NASVEVTRYT 480 PPSDKHTKTA KPSGTACSAS SDRPYACPYD GCQKAYIHEY KLKLHLKREH PGHDENAVLH 540 ALANAADNEM DEASDQDVYG AVKRSNGKSQ KKQSNPKPKM KLPPSKIARR KGSAPTPSST 600 LNVAKRPWTV KDETGDDDSE ETEDGDNAED GWRYGGNNDD FDDETEDED

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MSLKLWAKKS LIVIVNKEEV MELKGQCFLL NGFIFLGSIF LLNTLIIPAL WWILPHSSTF  60
YSFLRLSLIH LFYLLWFYPL YVFSIVLSTI WYNDIAKYGY AAMGTSNITA HKGETQNHPP  120
TLQNEHHVKR PSGLGGVMIG IGEQVYSILL LSVFFLEVYA TGFIPYIGKV LNFVLLSWMY  180
AYYCFEYKWN FNEVALDKRL DYFESYWAFF AGFGSPCVLA IFFFSPLVSY GIMAILFPLF  240
VLTATGSKAE QEISFEKDKR RDAGMERLPI FYVANKVSTN GIRCKTEKHN KTVLVNDSGI  300
IIDDWIPQDV VTTGGKCMLL RWVTEDTLKA LNEKEKEPSA PEPEPEPTTE VLFLCSYDGC  360
GKTFIDASAL KKHSNIHGER QFVCHYKGCG KKFLDSSKLK RHFLIHTGER HFVCPHEGCG  420
KVAFSLDFNL RSHMKTHSQE NYHLCPYPDC GKRYAHEYKL RNHIASLHEK NASVEVTRYT  480
PPSDKHTKTA KPSGTACSAS SDRPYACPYD GCQKAYIHEY KLKLHLKREH PGHDENAVLH  540
ALANAADNEM DEASDQDVYG AVKRSNGKSQ KKQSNPKPKM KLPPSKIARR KGSAPTPSST  600
LNVAKRPWTV KDETGDDDSE ETEDGDNAED GWRYGGNNDD FDDETEDED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-127	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV96239