PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV95456

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 286aa MW: 32106.1 Da PI: 9.0257

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95456	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.3	1.1e-17	115	169	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q Lee F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k OIV95456 115 RKKLRLSKDQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 169 778899***********************************************98 PP
2	HD-ZIP_I/II	127	7.9e-41	115	205	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlsk+q+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een++L+ke +eLr +lk OIV95456 115 RKKLRLSKDQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRKLHKELQELR-ALK 205 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MELALSLGDT QKPFSLLHNN PSSTLHNNKD PTSLCITLGG ASFSGKSQDK RRGSSDPPLQ 60 LDLLPSTPVL RPQQPSSHLQ IPWLTDAHDG ALSRKRREED GEERGSDDDE NGSTRKKLRL 120 SKDQSAFLEE SFKEHTTLNP KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL 180 KRCCETLTEE NRKLHKELQE LRALKTSQPF YMQLPATTLT MCPSCEKVAT NTTGGATTIH 240 HISTTTTTNN DNGSQVYAEL SLGKNNKILG FPYSQAHQQK AHNMAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	120	TRKKLRL
2	164	172	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	9e-60	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIV95456