PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV95445
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 290aa    MW: 30964 Da    PI: 9.5955
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV95445genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.49.4e-073558225
              -S---SGGGGTS--TTTTT-SS-S CS
   zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
              k ++C  f+ t  C++G++C+F H
  OIV95445 35 KSKPCTKFFSTSGCPFGESCHFLH 58
              7789******************** PP
2zf-CCCH253.3e-08100125227
               -S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
               k + C+ f     Ck+Gd+C+FaHg+
  OIV95445 100 KSRVCNKFNTAEGCKFGDKCHFAHGE 125
               6689********************96 PP
3zf-CCCH33.66.6e-11260284126
               --S---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
               +kt+lC++f + G C +G+rC+FaHg
  OIV95445 260 FKTKLCDNFTK-GSCTFGERCHFAHG 284
               69*********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDTRKRGRHD FNNFNGGFKK TKPETDSLST GVGSKSKPCT KFFSTSGCPF GESCHFLHYV  60
PGGYNAIAHM MHIAPAAPPS SRNIPAPQPV SNGSAQPTVK SRVCNKFNTA EGCKFGDKCH  120
FAHGEWELGK PIAPSFDDHR PLGPPSASRM PGRMEPHGLA ASFGANATAK ISVEASLAGA  180
IIGKGGVNSK QICRQTGAKL SIRDHESDPN LRNIELEGSF EQINEASNMV KELLFTLQMS  240
APPKLKSGAP GGHAPPGSNF KTKLCDNFTK GSCTFGERCH FAHGAADLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.13e-80C3H family protein