PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

OIV94794

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 243aa MW: 27272.9 Da PI: 6.8737

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94794	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	64.1	1.6e-20	126	160	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ OIV94794 126 CANCDTTSTPLWRNGPQGPKSLCNACGIRFKKEER 160 ********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MMHRSCNDSY QGHVMGHCTC GMFHSQTSSF SMLFSMPNHK PYDYDQHEPD MCSYNATPSS 60 SNVDCTLSLG TPSTRFTEDE EKRSCRPVSN FCWDLVQPNH STQSQTKSRK DSSSNNTNDS 120 LLPRRCANCD TTSTPLWRNG PQGPKSLCNA CGIRFKKEER RASAAATPTA ASGGVVDSSQ 180 MYSHHNNSWY AHSQSQKMQC LSPAMGNDFR FMDDGDQDSD NGIPFLSWRL NVTDRTNFVH 240 DFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50870.1	1e-48	GATA family protein

Link Out ? help Back to Top
Ensembl	OIV94794