PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV94566

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 451aa MW: 48789.4 Da PI: 6.7153

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94566	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.3	1.2e-14	184	220	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg + Tp +Rrgp g+++LCnaCGl+++ kg+ OIV94566 184 CQHCGIGEksTPAMRRGPAGPRSLCNACGLMWANKGT 220 **865556**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MESVNSKQSC EKLMMVPMQV DGSYHAISKG SSGSGSDEEA RVNSFSRTSE LTISFEGEVY 60 VFPAVTPEKV QAVLLLLGGQ EMPNSVPSSY CSLQQNYRDI GGINDPSQGS KRSRRFASLA 120 RFREKRKDRC FEKKIRYTCR KEVAERMHRK NGQFTSLKEN YKPPAENCGS SNGTPCPEST 180 ERRCQHCGIG EKSTPAMRRG PAGPRSLCNA CGLMWANKGT LRDLSKAGKI AFEHNEQDTS 240 ADIKPSTTEP ENCCTDQDKE YIIETAETVT NNLSIQVEHH DLSVHEQDTL EDLADASGTE 300 FEIPAGFDEQ LLHTYVGRSA RPAPRAAPSR PAPQPVNRAP PPATVQSGGG SLLGGIGSTI 360 AQGMAFGTGS AVAHRAVDAV MGPRTVQHEV TGAADTAPAP TANTFSGDAC SIHSKAFQDC 420 ITNYGNEISK CQFYMDMLAE CRRNSGSSLN A

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MESVNSKQSC EKLMMVPMQV DGSYHAISKG SSGSGSDEEA RVNSFSRTSE LTISFEGEVY  60
VFPAVTPEKV QAVLLLLGGQ EMPNSVPSSY CSLQQNYRDI GGINDPSQGS KRSRRFASLA  120
RFREKRKDRC FEKKIRYTCR KEVAERMHRK NGQFTSLKEN YKPPAENCGS SNGTPCPEST  180
ERRCQHCGIG EKSTPAMRRG PAGPRSLCNA CGLMWANKGT LRDLSKAGKI AFEHNEQDTS  240
ADIKPSTTEP ENCCTDQDKE YIIETAETVT NNLSIQVEHH DLSVHEQDTL EDLADASGTE  300
FEIPAGFDEQ LLHTYVGRSA RPAPRAAPSR PAPQPVNRAP PPATVQSGGG SLLGGIGSTI  360
AQGMAFGTGS AVAHRAVDAV MGPRTVQHEV TGAADTAPAP TANTFSGDAC SIHSKAFQDC  420
ITNYGNEISK CQFYMDMLAE CRRNSGSSLN A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	9e-61	GATA family protein

Link Out ? help Back to Top
Ensembl	OIV94566