PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV94421

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 327aa MW: 36847.2 Da PI: 7.4709

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94421	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	65.1	1e-20	77	121	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+C+rH+ r r rsrk +e+ OIV94421 77 DPEPGRCRRTDGKKWRCSKDAHPDSKYCDRHMIRRRCRSRKLVES 121 79***************************************9986 PP
2	QLQ	52.1	2.1e-18	18	53	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT aQ+q+L++Q+l++KyL a++ vPp+Ll++iqk OIV94421 18 LFTVAQWQELEHQALIFKYLKAGLTVPPDLLVPIQK 53 6*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MSVPNTTPAM MFTAAQPLFT VAQWQELEHQ ALIFKYLKAG LTVPPDLLVP IQKSLQSIMS 60 HQNYPSLGYY GNGKKIDPEP GRCRRTDGKK WRCSKDAHPD SKYCDRHMIR RRCRSRKLVE 120 SQSQSSSSSS VATTGTTTTT ATVSAASGTG TFQNLPLHTS CTRQGFTIGN GNNSTMNMME 180 PLPLTTEDSR KELRFGLSSE ADEHNFLQKD LGTMRHQSYY DFTSDDTWSL MSQIPQNIIS 240 ESRNRSTVVN NCFQQQTMRD TELLNLYDNG RSKELVFDGQ LSSPGCLKQE YQSPQSLFSD 300 SHLKMDLSSS TIDYRPIIDF NCNPDEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-37	GRF family protein

Link Out ? help Back to Top
Ensembl	OIV94421