PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV93755

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 488aa MW: 51616.7 Da PI: 8.07

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93755	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19	3.9e-06	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H+r H OIV93755 63 FVCEICNKGFQRDQNLQLHQRGH 85 89*******************98 PP
2	zf-C2H2	11.3	0.0011	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +++ OIV93755 139 WKCDKCSKKYAVQSDWKAHSKVC 161 58*****************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MSIDLDNVST TSGGEASVSS SGVNPTESSK PITKKKRNLP GMPDPEAEVI ALSPKTLMAT 60 NRFVCEICNK GFQRDQNLQL HQRGHNLPWK LRQRSSNEVK KKVYVCPEQT CVHHDPSRAL 120 GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKV CGTRENKCDC GTLFSRRDSF 180 ITHRAFCDAL ARESAGSQTV AVNSNSRSDS KVIMGDSLPQ SPATTTQSNA VQTQNQDLPE 240 NPPQIGEVQA TTVLNGSCNG CATTSNSVFT SLFAPSTIST SLQSQTPAFT GLVRAIGCPD 300 RPADHPDPSS SDPISLRISN NHGSSIFGAG VQEQHQYAPP PQPAMSATAL LQKAAQMGAA 360 ATNASLLQGF GVVSSSTTSH SSSQQHNLQW SHGQQLEPSE SGSLLAGLGL ELPCDNGSGL 420 KELMMGTPSF FSPKQTTLDF LGLGMAAGGS PGGGLSALIT SIGGGLDVTA AASFGNGEFP 480 DKDNGRSL

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MSIDLDNVST TSGGEASVSS SGVNPTESSK PITKKKRNLP GMPDPEAEVI ALSPKTLMAT  60
NRFVCEICNK GFQRDQNLQL HQRGHNLPWK LRQRSSNEVK KKVYVCPEQT CVHHDPSRAL  120
GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKV CGTRENKCDC GTLFSRRDSF  180
ITHRAFCDAL ARESAGSQTV AVNSNSRSDS KVIMGDSLPQ SPATTTQSNA VQTQNQDLPE  240
NPPQIGEVQA TTVLNGSCNG CATTSNSVFT SLFAPSTIST SLQSQTPAFT GLVRAIGCPD  300
RPADHPDPSS SDPISLRISN NHGSSIFGAG VQEQHQYAPP PQPAMSATAL LQKAAQMGAA  360
ATNASLLQGF GVVSSSTTSH SSSQQHNLQW SHGQQLEPSE SGSLLAGLGL ELPCDNGSGL  420
KELMMGTPSF FSPKQTTLDF LGLGMAAGGS PGGGLSALIT SIGGGLDVTA AASFGNGEFP  480
DKDNGRSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-135	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV93755