PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV93395
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 356aa    MW: 39796.8 Da    PI: 6.9559
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV93395genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.87e-07135155526
               --SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                C++f++ G C+ Gd C F+Hg
  OIV93395 135 ACPDFRK-GGCQKGDACEFSHG 155
               7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MMLGEEHHPT VHVPHVPPWS FFDDVVFSPL SVNGDVNAVN AGDYSPYYLH EALSALQRYL  60
PSNDDGDGDS EFDIPAMELD SPVDAFSCDH FRMFEFKIRR CGRGRSHDWT ECPYAHPGEK  120
ARRRDPRNFH YSGTACPDFR KGGCQKGDAC EFSHGVFECW LHPARYRTQP CKDGVSCRRR  180
VCFFAHTAEQ LRVLPQHSPQ SADSYDGSPL RLKTLQFIPS PELNSPMESP PVSPLTQSMV  240
FSLRNLQLEK MKSLPSSWNI PIGSPRFGSP MGPVTRPGFC SLPSTPTTPG RAGVNCFELW  300
DQSCCVEEPV MERVESGRNI RAKMFEKLSK ENSLGKPGSG PGKTGGASNV RWVLEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-114C3H family protein