PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV93094

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 244aa MW: 28220.2 Da PI: 9.3303

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93094	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	69	91	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F+++ L H++ H OIV93094 69 FECQYCFKEFTNSQALGGHQNAH 91 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MKKVDNGSFV RKRLRLFGFE LNLSKNNESC VKEPAERDEG VNSSNSYSSR GDKTAQEKSL 60 ERDQDERKFE CQYCFKEFTN SQALGGHQNA HKKERMKKKR LQLQARKASI KYYLQVSQTN 120 HGFAYNHGSK SNTPWFYDPS SYNNNSEFTF CEESQTCLNS KDQNTNFVSS DQKYSNWYSL 180 PPHVPSKQDN SCMFTFSNID NNRPFISMPH HFPASNQSHS KTLDLQLCLN LESNTRSISK 240 KGVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06650.1	6e-16	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV93094