PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV92956 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | GRF | ||||||||
Protein Properties | Length: 323aa MW: 36450.1 Da PI: 8.4778 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 63.3 | 3.5e-20 | 77 | 121 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+ + +++k+C+rH+ r r rsrk +e+ OIV92956 77 DPEPGRCRRTDGKKWRCSKVAHPDSKYCDRHMIRRRCRSRKLVES 121 79***************************************9985 PP | |||||||
2 | QLQ | 52.1 | 2e-18 | 18 | 53 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT aQ+q+L++Q+l++KyL a++ vPp+Ll++iqk OIV92956 18 LFTVAQWQELEHQALIFKYLKAGLTVPPDLLVPIQK 53 6*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MSVPNTPPAM MFAASQPLFT VAQWQELEHQ ALIFKYLKAG LTVPPDLLVP IQKSLELMMS 60 QQKHPSLGYY RNGKKIDPEP GRCRRTDGKK WRCSKVAHPD SKYCDRHMIR RRCRSRKLVE 120 SESQSSSVAT TGTTSTVSAA TGTFQNLPLH TNGTRQGFTI GNGNSNNSTM NMMEPLPLPT 180 EVSSKELRFG LSSDTEEHNF FQKDLGPMRH QGYDFTLDTS EDTWSLMSQI PRHLISESRS 240 RSTMANNCFH QQTMRDAELL NLYNVGRSKE LVFNGQLSSP GCLKQEYQPP QSLFSDSHLK 300 MDLSSSAIDY RPIIDFNCNS DAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 1e-35 | GRF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV92956 |