PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV92396 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | SBP | ||||||||
Protein Properties | Length: 173aa MW: 19460.7 Da PI: 8.834 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 100.8 | 1.1e-31 | 64 | 133 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C adl++ak+yhrrhkvCe+hskap v+v+g +qr fh+l efDe+krsCrrrLa+hnerrrk++ OIV92396 64 CQAERCGADLTDAKRYHRRHKVCEFHSKAPIVVVAGFRQR-------FHDLAEFDEAKRSCRRRLAGHNERRRKSNV 133 ************************************9996.......7**************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MEARSIERKR SIEKVRNIVE EVQDEVEEED EGGGCGCDEK KKGASGKRGL SGGGGGGGFS 60 LPSCQAERCG ADLTDAKRYH RRHKVCEFHS KAPIVVVAGF RQRFHDLAEF DEAKRSCRRR 120 LAGHNERRRK SNVEMCNEGC NRGKGQQEQQ TNERGRIQMN MGESCGYKSF HIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 3e-33 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV92396 |