PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

OIV91975

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 420aa MW: 46073.3 Da PI: 6.9848

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91975	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.4	6.3e-35	69	209	2	127
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssa.sec......eaesssssasns 85 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LGf ++sk++eWL+++a +i el+++ + + + +++ ++ ++n+ OIV91975 69 SGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGFEQPSKAVEWLINAASDSISELPSLnttfpdtpnqP---SdE-KrpsfdeVDVDTNNYHQNQ 165 689*************************************************************99998885431...221.1233444556666666667 PP TCP 86 ssgkaaksaakskksqksaasalnlak.esrakararare.rtr 127 +++ + +++a+s+ s++s+ s l+l++ e kar+ + +++ OIV91975 166 NQKLSLSKSACSSTSETSKGSGLSLSRpEICVKAREGGTKdKEK 209 77788888889999999999999999988889999985442222 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDKDDEIQAQ ACKFPRIGNG SNKLGSTRGN EEEDKRRVGG CGNDGSTNHF NSGSNWNNSS 60 RIVRVSRASG GKDRHSKVMT SKGLRDRRVR LSVTTAIQFY DLQDRLGFEQ PSKAVEWLIN 120 AASDSISELP SLNTTFPDTP NQPSDEKRPS FDEVDVDTNN YHQNQNQKLS LSKSACSSTS 180 ETSKGSGLSL SRPEICVKAR EGGTKDKEKE YESSHHITNH HHNVSQTASF TELLTGGFGN 240 VPTTTSANAS DECNLFNKAK QWSPMVMDYF NNNTLMVGPS SSSRNVSLSP FSDENHSVQL 300 QHFSFIPDHN FIPCSQPSEN LNFTISPTLA GYNRGTLQSN SQPHLMHPMQ RFSSPIDGSN 360 NNLPFFIGGS SAHSASAAST MDTGSNHHQQ LQFSPLFDGS LQLCYGDGTQ HSEQKGKAKN

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDKDDEIQAQ ACKFPRIGNG SNKLGSTRGN EEEDKRRVGG CGNDGSTNHF NSGSNWNNSS  60
RIVRVSRASG GKDRHSKVMT SKGLRDRRVR LSVTTAIQFY DLQDRLGFEQ PSKAVEWLIN  120
AASDSISELP SLNTTFPDTP NQPSDEKRPS FDEVDVDTNN YHQNQNQKLS LSKSACSSTS  180
ETSKGSGLSL SRPEICVKAR EGGTKDKEKE YESSHHITNH HHNVSQTASF TELLTGGFGN  240
VPTTTSANAS DECNLFNKAK QWSPMVMDYF NNNTLMVGPS SSSRNVSLSP FSDENHSVQL  300
QHFSFIPDHN FIPCSQPSEN LNFTISPTLA GYNRGTLQSN SQPHLMHPMQ RFSSPIDGSN  360
NNLPFFIGGS SAHSASAAST MDTGSNHHQQ LQFSPLFDGS LQLCYGDGTQ HSEQKGKAKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30210.2	2e-55	TCP family protein

Link Out ? help Back to Top
Ensembl	OIV91975