PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV91223

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 184aa MW: 20154.6 Da PI: 7.8994

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91223	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H OIV91223 41 FECKTCNRQFPSFQALGGHRASH 63 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MKREREIDST TMANYLMLLS GGGEFETTYF NSSNNNNNRV FECKTCNRQF PSFQALGGHR 60 ASHKKLRLSG EGDQMVNDST PKLKTHLCSI CGLEFAIGQA LGGHMRRHRV ATNSNVNMQS 120 SITTTSSGSG GGGGDNGDGS SDDTKIEKGN SKRVLFLDLN LTPLENDMEI LKIRQTIPLV 180 DCFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-32	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV91223