PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV91188
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 259aa    MW: 27205.7 Da    PI: 9.0009
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV91188genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.94.5e-106287227
              -S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
              kt+lC+ +   G Ck+Gd+C+FaHg+
  OIV91188 62 KTRLCKMYNSAGGCKFGDKCHFAHGE 87
              8***********************96 PP
2zf-CCCH35.22e-11226251127
               --S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
               +kt+ C +fa+ G C +GdrC+FaHgp
  OIV91188 226 FKTKMCENFAK-GSCTFGDRCHFAHGP 251
               69*********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MQHSTSGCPF GEGCHFLHYV PGGIKAVSQV INVGNSPAIP QGGRNPAAPP SFPDGSSPPA  60
VKTRLCKMYN SAGGCKFGDK CHFAHGEWEL GKPTAPSYED PRGFGQMQSN RIPGRVEPPP  120
QAHGAAAGFG ASATAKISIN ASLAGAVIGK NGINSKQICR VTGAKLSIRD HDSDPNLRNI  180
ELEGSFDQIK QASAMVHELI LNVSSAATGP PMKNFTSQTS APANNFKTKM CENFAKGSCT  240
FGDRCHFAHG PSELRKTGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.12e-54C3H family protein