PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90580

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 2124aa MW: 239428 Da PI: 7.5486

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90580	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42	2.5e-13	1753	1801	38	87
trihelix 38 m.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 m +e g++rs k+Ckek+enl k+ykk+keg+++r ++ +++++f+qlea OIV90580 1753 MaEEFGYQRSGKKCKEKFENLYKYYKKTKEGKGSR--QDGKHYRFFRQLEA 1801 43678**************************98..55667*****85 PP
2	trihelix	35.7	2.3e-11	2032	2097	1	64
trihelix 1 rWtkqevlaLiearremeerlrrg.k.lkkplWeevskkmrergferspkqCkekwenlnkrykki 64 +Wt+ e+ Li+++++ eerlr++ + +lW+e+s+k+ gf rs+ +Ck+ w++++ + + OIV90580 2032 KWTEIEISNLIQLKNSFEERLRENgClVHNGLWDEISAKLGCLGFDRSASECKQIWDEISISLRVT 2097 7*******************95244679*************************998766554 PP

Sequence ? help Back to Top
Protein Sequence Length: 2124 aa Download sequence
MLNFGEQLLG QDGNQFQMNN TRVSINPENP ILVRSNPIPD WQLNQIRRAN FQQFHVPGSG 60 YMNGMHMRGH YARAQHNMST GLNSRLELLL KNNANPISAA NSSFDVRMNR AAGNPLLPIF 120 RTQASSNVRE SYAGVQRSNI HSAPGIMYKE SNRLLIPNRN SEFNGSNSET LLKSSAQWSV 180 PNQVEGIPHG DSYPKYSLNY MPITEADASV TFNSFQSIPI TRDQLKFAGN QFCAIPDYTR 240 AGSTSQDKGK QEELISSTEK VQECYNGLLQ QIVDSSSAAI STSCGDQRGS DSNFCGEGSG 300 LGFDLNKTPD QKVATRRRKH RPKVITEGKP KRSSNPATQK KQVKENSPKK RKKVLKTEAT 360 PQADVIEETN GLTVPTRKTC RKALNFISDK SRNESQSRIV CHHDEAFRTT SDYRTAEMLS 420 GENVKTNSVF LSNQQNELTV QGRKRIITLP GTTEEKQIPK FLATEKGPAQ GNSVLCQERS 480 NGCMQQYIHA KEIGNILFQS ETCFENSQNT KELICQNTHQ SESNIPSSSI KGKVSKRKRK 540 SIDSQHNSAT NPLGTSLCQE ILQAGENFEG EALDKGFLET TNKKKTKKRL HGKVNGTSSC 600 QIMSKDESQK VIRKGKKVSQ SPPHVKMANC CTESDRFLEQ KNRGTSTGDC FAISGELHQI 660 YSTLIDEIIC RLNNLNLSES NTSAIEGQSA LVPYKGDGTI VPYQEPDIPK KHKPRPKVDL 720 DPETERTWKL LMGKEGSNSL DGTDKEKEKW WEEERNVFRG RADSFIARMH LVLGDRRFSK 780 WKGSVVDSVI GVFLTQNVSD HLSSSAFMSL SARFSLKSEG SRSYIVGTKT WVEEPDDTTM 840 SCGRGTFSEL AYHLGFGLPH NTSGVWRDSE TSRIQRIPIE TNNKSSEEEL LSSQDSLESS 900 ITQGTRGYGS CSRPSSESGP NRGCEPSKAQ FLTSTNSFQV GKTTMFQEFY NSVNGASLCE 960 ERTKDGQVQH AENLKQSLGV EGVNNRNFRS AFNYPSNFGY PQEQEPVVPS AYYEFHYPDT 1020 QGLETFQMNG NESFWPETVT THSKFPDNNY EKFGIPEIGD NADEPTEKQY GSGALSSPAL 1080 PTMNHSGPLS KHLDLLQGTS HILGSENIIS AANTQVCSDN SRAESNEQQI CSPSPTYKKK 1140 KTKVSKAKKV KPETEKKHAC DWDILRKKVL ANGTKIERGK ETMDSLDYEA VRCASVKEIS 1200 DTIKERGMNN MLADRIKEFL NRLVIDHGSI DLEWLRHVPP DQVKDYLLSI RGLGLKSVEC 1260 VRLLTLHHLA FPVDTNVGRI VVRLGWVPLQ PLPETLQIHL LELYPMLESI QKYLWPRLCK 1320 LDQRTLYELH YQMITFGKVF CTKSKPNCNA CPMRAECRHF ASAFASARLA LPGPEEKGIV 1380 GMSVPIAADK NPYVNMKPVI LPISENNFIG EATHESGNCE PIIEEPTTPE QDSTNALESD 1440 IEDFFVEDPD EIPPIEFNIS ESALNVQSFM QYMEHGDGEM SKALVALTSQ SASIPVQKIK 1500 TVSRLRTEHR VYELPDSHPL LEKMDKREPD DPSPYLLAIW APGETANSIE PPERRCGSQD 1560 STDMCNDKTC FSCNSIREAN SQTVRGTLLI PCRTATRGSF PLNGTYFQVN ELFADHASSV 1620 QPIDIPRAWI WNLPRRTVYF GTSVSSIFKG LSTPEIQHCF WRGFVCVRGF DQQKRAPRPL 1680 QARLHFAARF TDRAQIADIN QKKSFMHTRD RIRDCGVKAT SAFIMSPSWH SSIGYNLIYS 1740 LQTLVIELKS RIMAEEFGYQ RSGKKCKEKF ENLYKYYKKT KEGKGSRQDG KHYRFFRQLE 1800 AICGEPTNIH HNASTSDNKT HHHDASNTRA GFQSPTFATN QDSVNVDHFP NHMSSESLSF 1860 SNLSDQLETS SSENNDEDLS AIAYMMNQSR DNSNKHKGLE LEHRQSEGRV RKSWRGKIEE 1920 IVGSHTRKII ETQDAWMEKM LSVVERREQE MASKEEERKR KESMRFDQEV HELWAKERAW 1980 VEARDAALIK VVRKHFGFKE LEAFPLHHEA MVVEEEQQNK NNEYPCETAS GKWTEIEISN 2040 LIQLKNSFEE RLRENGCLVH NGLWDEISAK LGCLGFDRSA SECKQIWDEI SISLRVTTVE 2100 CSSSSANTTR PWYLGLKLRD DDEL

Sequence ? help Back to Top

Protein Sequence Length: 2124 aa Download sequence

MLNFGEQLLG QDGNQFQMNN TRVSINPENP ILVRSNPIPD WQLNQIRRAN FQQFHVPGSG  60
YMNGMHMRGH YARAQHNMST GLNSRLELLL KNNANPISAA NSSFDVRMNR AAGNPLLPIF  120
RTQASSNVRE SYAGVQRSNI HSAPGIMYKE SNRLLIPNRN SEFNGSNSET LLKSSAQWSV  180
PNQVEGIPHG DSYPKYSLNY MPITEADASV TFNSFQSIPI TRDQLKFAGN QFCAIPDYTR  240
AGSTSQDKGK QEELISSTEK VQECYNGLLQ QIVDSSSAAI STSCGDQRGS DSNFCGEGSG  300
LGFDLNKTPD QKVATRRRKH RPKVITEGKP KRSSNPATQK KQVKENSPKK RKKVLKTEAT  360
PQADVIEETN GLTVPTRKTC RKALNFISDK SRNESQSRIV CHHDEAFRTT SDYRTAEMLS  420
GENVKTNSVF LSNQQNELTV QGRKRIITLP GTTEEKQIPK FLATEKGPAQ GNSVLCQERS  480
NGCMQQYIHA KEIGNILFQS ETCFENSQNT KELICQNTHQ SESNIPSSSI KGKVSKRKRK  540
SIDSQHNSAT NPLGTSLCQE ILQAGENFEG EALDKGFLET TNKKKTKKRL HGKVNGTSSC  600
QIMSKDESQK VIRKGKKVSQ SPPHVKMANC CTESDRFLEQ KNRGTSTGDC FAISGELHQI  660
YSTLIDEIIC RLNNLNLSES NTSAIEGQSA LVPYKGDGTI VPYQEPDIPK KHKPRPKVDL  720
DPETERTWKL LMGKEGSNSL DGTDKEKEKW WEEERNVFRG RADSFIARMH LVLGDRRFSK  780
WKGSVVDSVI GVFLTQNVSD HLSSSAFMSL SARFSLKSEG SRSYIVGTKT WVEEPDDTTM  840
SCGRGTFSEL AYHLGFGLPH NTSGVWRDSE TSRIQRIPIE TNNKSSEEEL LSSQDSLESS  900
ITQGTRGYGS CSRPSSESGP NRGCEPSKAQ FLTSTNSFQV GKTTMFQEFY NSVNGASLCE  960
ERTKDGQVQH AENLKQSLGV EGVNNRNFRS AFNYPSNFGY PQEQEPVVPS AYYEFHYPDT  1020
QGLETFQMNG NESFWPETVT THSKFPDNNY EKFGIPEIGD NADEPTEKQY GSGALSSPAL  1080
PTMNHSGPLS KHLDLLQGTS HILGSENIIS AANTQVCSDN SRAESNEQQI CSPSPTYKKK  1140
KTKVSKAKKV KPETEKKHAC DWDILRKKVL ANGTKIERGK ETMDSLDYEA VRCASVKEIS  1200
DTIKERGMNN MLADRIKEFL NRLVIDHGSI DLEWLRHVPP DQVKDYLLSI RGLGLKSVEC  1260
VRLLTLHHLA FPVDTNVGRI VVRLGWVPLQ PLPETLQIHL LELYPMLESI QKYLWPRLCK  1320
LDQRTLYELH YQMITFGKVF CTKSKPNCNA CPMRAECRHF ASAFASARLA LPGPEEKGIV  1380
GMSVPIAADK NPYVNMKPVI LPISENNFIG EATHESGNCE PIIEEPTTPE QDSTNALESD  1440
IEDFFVEDPD EIPPIEFNIS ESALNVQSFM QYMEHGDGEM SKALVALTSQ SASIPVQKIK  1500
TVSRLRTEHR VYELPDSHPL LEKMDKREPD DPSPYLLAIW APGETANSIE PPERRCGSQD  1560
STDMCNDKTC FSCNSIREAN SQTVRGTLLI PCRTATRGSF PLNGTYFQVN ELFADHASSV  1620
QPIDIPRAWI WNLPRRTVYF GTSVSSIFKG LSTPEIQHCF WRGFVCVRGF DQQKRAPRPL  1680
QARLHFAARF TDRAQIADIN QKKSFMHTRD RIRDCGVKAT SAFIMSPSWH SSIGYNLIYS  1740
LQTLVIELKS RIMAEEFGYQ RSGKKCKEKF ENLYKYYKKT KEGKGSRQDG KHYRFFRQLE  1800
AICGEPTNIH HNASTSDNKT HHHDASNTRA GFQSPTFATN QDSVNVDHFP NHMSSESLSF  1860
SNLSDQLETS SSENNDEDLS AIAYMMNQSR DNSNKHKGLE LEHRQSEGRV RKSWRGKIEE  1920
IVGSHTRKII ETQDAWMEKM LSVVERREQE MASKEEERKR KESMRFDQEV HELWAKERAW  1980
VEARDAALIK VVRKHFGFKE LEAFPLHHEA MVVEEEQQNK NNEYPCETAS GKWTEIEISN  2040
LIQLKNSFEE RLRENGCLVH NGLWDEISAK LGCLGFDRSA SECKQIWDEI SISLRVTTVE  2100
CSSSSANTTR PWYLGLKLRD DDEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	356	RRRKHRPKVITEGKPKRSSNPATQKKQVKENSPKKRKKVLK
2	348	354	PKKRKKV
3	349	353	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	5e-44	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV90580