PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV90484 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NF-YB | ||||||||
Protein Properties | Length: 173aa MW: 19055.2 Da PI: 6.6292 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 164 | 2.1e-51 | 29 | 121 | 2 | 94 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 req+ flPian+srimkkvlP n+ki+kdak++vqecvsef+sf+tseasdkc rekrktingddllwa+a +Gfe+y+eplk+yl++yre + OIV90484 29 REQEGFLPIANISRIMKKVLPPNGKIAKDAKDIVQECVSEFVSFITSEASDKCMREKRKTINGDDLLWAMAIVGFEEYIEPLKIYLTRYREGD 121 89****************************************************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MSESPVSPGG GDGGGSHDSG DHSPRSNHRE QEGFLPIANI SRIMKKVLPP NGKIAKDAKD 60 IVQECVSEFV SFITSEASDK CMREKRKTIN GDDLLWAMAI VGFEEYIEPL KIYLTRYREG 120 DTKGLTKGGH PPSRKDVHPS PNAQFSHQSS FSQGFDYSNS QAQHMTLPYQ GSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 6e-66 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV90484 |