PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV90360

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 561aa MW: 64432.6 Da PI: 6.5803

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90360	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92	6.1e-29	128	213	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+++r++++ +++++++k+plW+evs+ m +++g++rs k+Ckek+enl k+ykk+k+g+ +r ++ +++++f+qlea OIV90360 128 RWPRQETLTLLDIRSQLHPKFKEANSKGPLWDEVSRIMsEDHGYQRSGKKCKEKFENLYKYYKKTKDGKAGR--QDGKHYRFFRQLEA 213 8***********************************888*************************98..55667*****85 PP
2	trihelix	38.6	2.7e-12	433	494	18	83
trihelix 18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 +rl++ + + Weev++km+ g+er+p +Ckekwen++ ki + ++k ++s +c yf+ OIV90360 433 TTRLQELRTEVETWEEVANKMACYGYERTPLMCKEKWENISSNNAKIGNKKRK--ENS--SCFYFE 494 46777888999*******************************98888777666..334..599997 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MEDHHHHNHD HQQQQYAITD LMQLMTGPRS LHFPSIPLPT ATQPTAAELF PGYHRNLIPH 60 HHQHYEMMMF GRDIMHPSCN IHDFASTDSV APPTATTAAT TSASTPPLSG GLEVENGCCI 120 GGDASTGRWP RQETLTLLDI RSQLHPKFKE ANSKGPLWDE VSRIMSEDHG YQRSGKKCKE 180 KFENLYKYYK KTKDGKAGRQ DGKHYRFFRQ LEALYGENIN HFSVPETNFG TNIRLETSSI 240 NTQSQTNLQN FSLGLTNSTD FETSLTDNDG IDHNNDSIDG LMEINNGSML EKRKNERKSR 300 KCWKVKIKDF IDSQIRKLVE KQEEWLDKLV KTMEQKEKER VLREEEWRKQ EVNRLEREHK 360 FWAKERAWIE ARDAALMEAL QKVSGGEIKG SEAHEGVEIA AEKRINSENQ SGDGSEILNS 420 SVKVGDNWQE HETTRLQELR TEVETWEEVA NKMACYGYER TPLMCKEKWE NISSNNAKIG 480 NKKRKENSSC FYFENNDQSS LYNQGNAYCD INDQRPQIKD GSSPSNSKVG HADPCFPFLM 540 SEGGNLWENY GLKINKSNQN H

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MEDHHHHNHD HQQQQYAITD LMQLMTGPRS LHFPSIPLPT ATQPTAAELF PGYHRNLIPH  60
HHQHYEMMMF GRDIMHPSCN IHDFASTDSV APPTATTAAT TSASTPPLSG GLEVENGCCI  120
GGDASTGRWP RQETLTLLDI RSQLHPKFKE ANSKGPLWDE VSRIMSEDHG YQRSGKKCKE  180
KFENLYKYYK KTKDGKAGRQ DGKHYRFFRQ LEALYGENIN HFSVPETNFG TNIRLETSSI  240
NTQSQTNLQN FSLGLTNSTD FETSLTDNDG IDHNNDSIDG LMEINNGSML EKRKNERKSR  300
KCWKVKIKDF IDSQIRKLVE KQEEWLDKLV KTMEQKEKER VLREEEWRKQ EVNRLEREHK  360
FWAKERAWIE ARDAALMEAL QKVSGGEIKG SEAHEGVEIA AEKRINSENQ SGDGSEILNS  420
SVKVGDNWQE HETTRLQELR TEVETWEEVA NKMACYGYER TPLMCKEKWE NISSNNAKIG  480
NKKRKENSSC FYFENNDQSS LYNQGNAYCD INDQRPQIKD GSSPSNSKVG HADPCFPFLM  540
SEGGNLWENY GLKINKSNQN H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-116	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV90360