PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

OIV90289

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 273aa MW: 31479.9 Da PI: 4.3968

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90289	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.1	2e-20	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e++++LAkklgL+ rqV vWFqNrRa++k OIV90289 64 KKRRLTSEQVHLLEKNFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 117 56789************************************************9 PP
2	HD-ZIP_I/II	131	4.5e-42	63	153	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl++eqv+lLE++Feee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ k++e+L++e+ OIV90289 63 EKKRRLTSEQVHLLEKNFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSSYDSIVKDNEKLKSEV 153 69*************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MDSGHLFFNT ACRGNNMIFL GNGDLSFQGR SMMSMEESSK RRPFFSSPDE LFDDEYYEEL 60 LPEKKRRLTS EQVHLLEKNF EEENKLEPER KTQLAKKLGL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDVLKA SYDSLLSSYD SIVKDNEKLK SEVLSLHEKL QVEAKEIERE EPISDKKAET 180 VALDIAQITG SVSSGIVDEG SPQIVVDSVD SYFPAENYVM EPIERVQSEE DDGSDDGTSY 240 FSDVFVAHEN EQQNNEALGW WSNMLHNGPQ VLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	6e-57	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIV90289