PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV90182

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 361aa MW: 40780.8 Da PI: 5.0935

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90182	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.3	3.1e-08	57	102	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC +C ++H++ H +vp+ OIV90182 57 VWVCEICESAPAAFLCKVDAATLCSSCDAHIHNSnsqascHHRVPI 102 689*****************************88999999887775 PP
2	CCT	72.6	9.5e-25	278	321	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeKki Y+sRKa+Ae+RpR+KGrFvk++ OIV90182 278 REAKVLRYREKKKTRKFEKKIMYASRKAYAETRPRIKGRFVKET 321 9*****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MLKNNGVGSS NKWSRVCDTC HSAACIVYCL ADSLYLCSLC DAKFHAPNCG ASWHERVWVC 60 EICESAPAAF LCKVDAATLC SSCDAHIHNS NSQASCHHRV PILPIIGSLL GEEQDHDIID 120 LKDMSLELKR DGYEAEKKEE EVFNEVEDVA EAASWLLPNP VQNSDENEEN NIILYGDNNQ 180 FSGSQYNDKN SYSVVSQEKE NYAEVIVVPV QIQQQSQQFQ LGLDIHSFEF GLSCNDSSVG 240 VVPESAMSDV SIPHSKPLTI GTSDLFPHIQ RPFTTLEREA KVLRYREKKK TRKFEKKIMY 300 ASRKAYAETR PRIKGRFVKE TDVEETGYGI VPSELFMNIQ LNGEKIEDKR REGCEQHQIR 360 F

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MLKNNGVGSS NKWSRVCDTC HSAACIVYCL ADSLYLCSLC DAKFHAPNCG ASWHERVWVC  60
EICESAPAAF LCKVDAATLC SSCDAHIHNS NSQASCHHRV PILPIIGSLL GEEQDHDIID  120
LKDMSLELKR DGYEAEKKEE EVFNEVEDVA EAASWLLPNP VQNSDENEEN NIILYGDNNQ  180
FSGSQYNDKN SYSVVSQEKE NYAEVIVVPV QIQQQSQQFQ LGLDIHSFEF GLSCNDSSVG  240
VVPESAMSDV SIPHSKPLTI GTSDLFPHIQ RPFTTLEREA KVLRYREKKK TRKFEKKIMY  300
ASRKAYAETR PRIKGRFVKE TDVEETGYGI VPSELFMNIQ LNGEKIEDKR REGCEQHQIR  360
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	4e-66	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIV90182