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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIV90070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27953.1 Da PI: 6.7851 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6.1e-18 | 19 | 66 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 GVr+++ +g+WvAeI+d ++ r +lg+f+taeeAa+a+++a+ l+g OIV90070 19 IGVRQRP-SGKWVAEIKDtI----QKIRMWLGTFDTAEEAARAYDEAACLLRG 66 6******.7*********33....35**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MLIKKRGKYK GRNNTNKLIG VRQRPSGKWV AEIKDTIQKI RMWLGTFDTA EEAARAYDEA 60 ACLLRGSNAR TNFITHVSSD SPLAFRIRNL LNNRKGNKEH ANATSSDASN STSTSTSTNS 120 SNYDKSNNSL SNVTTTQNTQ LYDDAYRPDL SNFKEEFESC FQQNHSENFG YVFEGFPFAQ 180 VLEIPKIDGM QDTNISLEIS EFERMKVERQ ISASLYAMNG VKEYMQTVQD SNETLWDLPP 240 LCSFLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-35 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIV90070 |