PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIV89569

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 353aa MW: 39827.1 Da PI: 9.7014

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89569	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	54.4	3.2e-17	53	152	2	81
trihelix 2 WtkqevlaLiearr.emeerlrrgk...................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 Wt qe+l Li+a++ ++e+rl+++ + +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ e k + esss +y OIV89569 53 WTIQETLILITAKKlDDERRLKTTTtssnlstpssstpacgsrnTGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYETKSSLESSSDSSY 152 ***********9534444444324556667777777778777999***************************************986555554444 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MMNNTISNPS TTPLLPPPTL PSQPHQPPFI QGGAIEPSSF TTPLIREYRK GNWTIQETLI 60 LITAKKLDDE RRLKTTTTSS NLSTPSSSTP ACGSRNTGEL RWKWVENYCW SHGCLRSQNQ 120 CNDKWDNLLR DYKKVRDYET KSSLESSSDS SYWILNKQQR KELNLPSNLV FEMYQAISEV 180 LQRKQTQRIT TTQPQPLVTK TSSPPPLQTI QIPLPPPLPL PPPPPLPIHQ PPLPQAPVSS 240 TTPTVSERSQ SSKGTEDSDD EDDGSEFKRR KIRNLGSSIM KSATVLAQAL KTCEEKKEKR 300 HIELMKLEQR RIQVEEARNE VHRQGIATLI AAVTNLSGAI QSLINNDQRH GQR

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MMNNTISNPS TTPLLPPPTL PSQPHQPPFI QGGAIEPSSF TTPLIREYRK GNWTIQETLI  60
LITAKKLDDE RRLKTTTTSS NLSTPSSSTP ACGSRNTGEL RWKWVENYCW SHGCLRSQNQ  120
CNDKWDNLLR DYKKVRDYET KSSLESSSDS SYWILNKQQR KELNLPSNLV FEMYQAISEV  180
LQRKQTQRIT TTQPQPLVTK TSSPPPLQTI QIPLPPPLPL PPPPPLPIHQ PPLPQAPVSS  240
TTPTVSERSQ SSKGTEDSDD EDDGSEFKRR KIRNLGSSIM KSATVLAQAL KTCEEKKEKR  300
HIELMKLEQR RIQVEEARNE VHRQGIATLI AAVTNLSGAI QSLINNDQRH GQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	299	KRRKIRNLGSSIMKSATVLAQALKTCEEKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-44	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV89569