PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT40786

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 321aa MW: 36729.7 Da PI: 9.2829

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT40786	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.3	1e-55	18	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 lppGfrFhPtdeel+++yL kkv ++++ + +i evd++kvePwdLp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkdke+++ +++lvg OIT40786 18 LPPGFRFHPTDEELITHYLSKKVVDNNFFA-IAIGEVDMNKVEPWDLPWKAKMGEKEWYFFCVRDKKYPTGMRTNRATAAGYWKATGKDKEIFR-GKSLVG 116 79***********************877.78***********888999************************************.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrle 129 +kktLvfy+grapkgekt+Wv+heyrle OIT40786 117 MKKTLVFYRGRAPKGEKTNWVIHEYRLE 144 **************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MENFLGPVVK EEDQQLQLPP GFRFHPTDEE LITHYLSKKV VDNNFFAIAI GEVDMNKVEP 60 WDLPWKAKMG EKEWYFFCVR DKKYPTGMRT NRATAAGYWK ATGKDKEIFR GKSLVGMKKT 120 LVFYRGRAPK GEKTNWVIHE YRLEGRLSLQ NLPRTTKQND WVISRVFYKS TGGNKVHISG 180 LMRLNSTETE MGNSVLPTMS DSESSHVHCF SNFVTAQNSQ KDMTNYFNNS SIPSLPNKFA 240 LNLTLPTQGT LLNPGSFPMQ DPPSLRNLYQ NYGQNMVQNL KKEKEIVSVS QETGVSTDMN 300 NEFSSSAALV GPQYLDYLWN Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-120	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT40786