PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT40778

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 508aa MW: 55372.5 Da PI: 5.5621

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT40778	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.2	2.1e-39	156	215	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s OIT40778 156 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNS 215 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MRESKDPEIK LFGKKIALPE NEKVLPLIVP GEDSGDGNSG NASCGVKDSE TNTGFDCDGC 60 LEDEKASSEE KDKEIDEENQ EAEKNHSSGE LSETKSEEKD QNQMMEESED PKLSSESDNN 120 PKTPNIDEDS PALKTSKTEN DPNNASNSQQ KPLKKPDKIL PCPRCNSMDT KFCYYNNYNV 180 NQPRHFCKSC QRYWTAGGTM RNVPVGAGRR KNKNSAPHCR HITIPEALQA ARIDPPNGFQ 240 HPTFKPNGTV LSFGPDSPLC ESMASVLNLA EKKVPNGTRN GFHGPENKNS IRKGGENGDD 300 CCSGSSVTTS TSMVDGGTHR RNEVVVPNVN GFAPPVPCIP SVPWPYQWNA AVPLPAICPP 360 GYPLPFCPPP YWNCNMLGPW SIPWLTPPSP TENPKGSGST PNSPLGKHSR EGDLLKSNSP 420 DEKEPSEQKN SETSVLVPKT LRIDDPDEAA KSSIWSTLGI KYDSVSRGGL FKALQPKSDK 480 KDHSATTSPM LQANPAALSR SLSFQERA

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MRESKDPEIK LFGKKIALPE NEKVLPLIVP GEDSGDGNSG NASCGVKDSE TNTGFDCDGC  60
LEDEKASSEE KDKEIDEENQ EAEKNHSSGE LSETKSEEKD QNQMMEESED PKLSSESDNN  120
PKTPNIDEDS PALKTSKTEN DPNNASNSQQ KPLKKPDKIL PCPRCNSMDT KFCYYNNYNV  180
NQPRHFCKSC QRYWTAGGTM RNVPVGAGRR KNKNSAPHCR HITIPEALQA ARIDPPNGFQ  240
HPTFKPNGTV LSFGPDSPLC ESMASVLNLA EKKVPNGTRN GFHGPENKNS IRKGGENGDD  300
CCSGSSVTTS TSMVDGGTHR RNEVVVPNVN GFAPPVPCIP SVPWPYQWNA AVPLPAICPP  360
GYPLPFCPPP YWNCNMLGPW SIPWLTPPSP TENPKGSGST PNSPLGKHSR EGDLLKSNSP  420
DEKEPSEQKN SETSVLVPKT LRIDDPDEAA KSSIWSTLGI KYDSVSRGGL FKALQPKSDK  480
KDHSATTSPM LQANPAALSR SLSFQERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-83	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT40778