PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40737
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 327aa    MW: 37020.9 Da    PI: 4.434
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40737genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.4e-10147190755
               HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + Er+RR r+++++  Lr+l+P+      +K++Ka+i   A+ Y++ Lq
  OIT40737 147 ISERKRRGRMKEKLYALRSLVPNI-----TKMDKASIIGDAILYVQGLQ 190
               67*********************7.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MESGNAYSTM PMENVNDVEL INFMDEANFE QFIELIRGET ADPIVKFCPN YDCEHITGCF  60
PSTDVQFEPT PMDIFDWNAT NISNNPISLF SSLPGEMKLG EEEEEDEDED NNDYEESSGT  120
TTTTTTNMLP ATPTKKSTRT DRSRTLISER KRRGRMKEKL YALRSLVPNI TKMDKASIIG  180
DAILYVQGLQ TQAKLLKAEI EGLECSFNET NNNPFQNTKQ MKLMTHYPAF KRISKMDVFK  240
VEERSIYARL VCNKGRLVAG SLFKALESLS GFNVQSSNLA ISADDYILTF TLNVRECEVD  300
MNLANLKLWI ASAFLNQGFY IETLPLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-72bHLH family protein