PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40494
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 428aa    MW: 46662 Da    PI: 6.3229
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40494genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.3e-20200249255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  OIT40494 200 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 249
               8********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MCLLIKVANP GESGEHDRIP STGGDSESTT TTTTTTTEGG IPQPYEQSFE EMLRQQIQQE  60
TEYLMTSSAT PMFSGYSQTK EMSAMVTALT HVVSGRRQGE LTYRPEITTS FGGGSPSSSS  120
SGSWAGQKRS RDQEESVAAE QVQRVYGGFG EFRGGESSSS VKPEEASSMV APPTNTTAAA  180
QPTSQPAEGG AEETGERRKR YRGVRQRPWG KWAAEIRDPH KAARVWLGTF DTAEAAARAY  240
DEAALRFRGN RAKLNFPENV RSLPQQQQQP PQPTTRSAIS SSSAVSQFPL MAAATTPSPF  300
FQTYQPQQQP PFQSSEMVRD YWEYSQLLQN PGDFHAQQSS SSLLEQMLFA SSSMGLLHSH  360
TFPSYASSSS LATSSSASSP AYPLFYSAQQ SRFFQPPQTS HQNQTSSSSS SFPAPFWTSS  420
THYPPSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.18e-22ERF family protein