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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT40455 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | bHLH | ||||||||
| Protein Properties | Length: 92aa MW: 10458.8 Da PI: 8.5214 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 20.9 | 6.4e-07 | 20 | 59 | 15 | 54 |
HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
+i + +++L++llP+ + + K s + +L+++++YI++L
OIT40455 20 QIIELMSKLQQLLPEiR-TRRTNKASASKVLQETCNYIRNL 59
6667899********77.56666799999**********99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 92 aa Download sequence |
MSGRRSRQSS EGTSRISDDQ IIELMSKLQQ LLPEIRTRRT NKASASKVLQ ETCNYIRNLH 60 REVDDLSDRL SQLLSTIDAD SPEAAIIRSL LM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G28857.1 | 2e-35 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT40455 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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