PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT40383

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

FAR1

Protein Properties

Length: 1332aa MW: 152678 Da PI: 5.5749

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT40383	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	7.2e-22	126	209	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH + OIT40383 126 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTMKEAN-----SRRKETRTGCLAMIRLRLVESSRWRVDDVKLEHNHLF 209 69**************************************99888.....8999*****************************77 PP
2	FAR1	68.3	2e-21	725	807	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAk GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH ++ OIT40383 725 FYNCYAKVHGFGVRVSNTWYR-KSRERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMENKRWRIIEVELEHNHLVS 807 9*************99997.66679**********99888.....*********************************765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1332 aa Download sequence
MEEGLGTSEQ LPEDDGSNNE VDSEEAFDIT CNGDQVLNVE ADELEATTGQ ILEFESHEAE 60 KSCEHVLDFE SSDPRDNSHQ LLEFHSNGLG GGNTTIIDDH TGSSPGKFYP PPVVGMEFES 120 YEDAYNYYNC YAKELGFAIR VKSSWTKRNS KEKRGAVLCC NCEGFKTMKE ANSRRKETRT 180 GCLAMIRLRL VESSRWRVDD VKLEHNHLFD PERVQNSKSH KKMDAGVKRK LEPAVDVEVR 240 TIKLYRTPAV ETLGYGSLDE RAFGGQIDGS TRLKLKEGDT QVIYNFFCRV QLTKPNFFYI 300 MDLNDEGYLK NVFWIDPRSR AAYAYFGDVV VVDTTCLSKK YDIPLLAFFG LNHHKQTLLL 360 GCGLLADESF ETYVWLLRAW LSCMSGRPPQ TIITDRCMAL QNAISEVFPR AQHRLNLSII 420 LGSIFNTVGQ VGESEVFHEV LYSTVYNSVK VDEFEVAWEE MIHQFGFRGY GWLQSLYEDR 480 ERWAPIYMKD SFFAGISIDQ PGIAQIHPNA PIITYIVKER GAQGDTGDAR DFEVTYDKIG 540 VEVRCICSCF NFKGYLCRHA LSVLNYNGIE EIPNHYILTR WRKDFKRLYA PELGSSNIDV 600 SNPVQRFDHL HKWAMQVVDE GMTSQDHYMV AWQAFKESLN KTRGTQPITA GSGSEIDVDG 660 STTFQMDGLS LNAEPIFDDE TEEFEIDGEC AMTEYVGQSG VIEGENPVPP AFGMEFETYE 720 DVYYFYNCYA KVHGFGVRVS NTWYRKSRER YRGKLSCSSA GFKKKSEANR PRPETRTGCP 780 AMIKFRLMEN KRWRIIEVEL EHNHLVSPST EKFYKSHRNI SSGSKRSLQM DANQDIQKIR 840 LFRTVIIDPD DVRKLNIDEG EFRNTIVQSN NHLILKPGDA QAFHSFFIDL QLVNPDFFYV 900 MDLNEKGCLR NVFWAEARFK AAYSYFGDVV RIDTACLTTK YEIPLVVIAG VNHHGQSVPL 960 GCGLVAGETV ESFIWLLRAW LTCMVGRPPQ TIITDQSRVM QTAIADVLPR SSYCFSLSHI 1020 MKKVPEELGG LHEYEVIKKA FTKAIYQSSR AEEFEAAWED MILCHGIRDH KWLQTLHDNR 1080 KHWAPVYLKD TFLAGMVSVT LSEKEASPFD EYLANHTPLK EFLNSYNQCL KEIYQREALA 1140 DTESRNSSFM LKSRFYFEMQ LSKVYTNHIF EKFQIEVEGM FSCLSTRQVS IDGSIVTYIV 1200 KEHEVENVNE AKDYEVTLNT AVAEVLCACG LFNLEGFLCR HALCVLSQNS FEEIPPQYIL 1260 SRWRKDIHRS YVLDYGCNLI DTKNPVHRYD NLYKCAVKLV EEGRKSNERY KFTLEALGEI 1320 LNKVSLQDHN TL

Sequence ? help Back to Top

Protein Sequence Length: 1332 aa Download sequence

MEEGLGTSEQ LPEDDGSNNE VDSEEAFDIT CNGDQVLNVE ADELEATTGQ ILEFESHEAE  60
KSCEHVLDFE SSDPRDNSHQ LLEFHSNGLG GGNTTIIDDH TGSSPGKFYP PPVVGMEFES  120
YEDAYNYYNC YAKELGFAIR VKSSWTKRNS KEKRGAVLCC NCEGFKTMKE ANSRRKETRT  180
GCLAMIRLRL VESSRWRVDD VKLEHNHLFD PERVQNSKSH KKMDAGVKRK LEPAVDVEVR  240
TIKLYRTPAV ETLGYGSLDE RAFGGQIDGS TRLKLKEGDT QVIYNFFCRV QLTKPNFFYI  300
MDLNDEGYLK NVFWIDPRSR AAYAYFGDVV VVDTTCLSKK YDIPLLAFFG LNHHKQTLLL  360
GCGLLADESF ETYVWLLRAW LSCMSGRPPQ TIITDRCMAL QNAISEVFPR AQHRLNLSII  420
LGSIFNTVGQ VGESEVFHEV LYSTVYNSVK VDEFEVAWEE MIHQFGFRGY GWLQSLYEDR  480
ERWAPIYMKD SFFAGISIDQ PGIAQIHPNA PIITYIVKER GAQGDTGDAR DFEVTYDKIG  540
VEVRCICSCF NFKGYLCRHA LSVLNYNGIE EIPNHYILTR WRKDFKRLYA PELGSSNIDV  600
SNPVQRFDHL HKWAMQVVDE GMTSQDHYMV AWQAFKESLN KTRGTQPITA GSGSEIDVDG  660
STTFQMDGLS LNAEPIFDDE TEEFEIDGEC AMTEYVGQSG VIEGENPVPP AFGMEFETYE  720
DVYYFYNCYA KVHGFGVRVS NTWYRKSRER YRGKLSCSSA GFKKKSEANR PRPETRTGCP  780
AMIKFRLMEN KRWRIIEVEL EHNHLVSPST EKFYKSHRNI SSGSKRSLQM DANQDIQKIR  840
LFRTVIIDPD DVRKLNIDEG EFRNTIVQSN NHLILKPGDA QAFHSFFIDL QLVNPDFFYV  900
MDLNEKGCLR NVFWAEARFK AAYSYFGDVV RIDTACLTTK YEIPLVVIAG VNHHGQSVPL  960
GCGLVAGETV ESFIWLLRAW LTCMVGRPPQ TIITDQSRVM QTAIADVLPR SSYCFSLSHI  1020
MKKVPEELGG LHEYEVIKKA FTKAIYQSSR AEEFEAAWED MILCHGIRDH KWLQTLHDNR  1080
KHWAPVYLKD TFLAGMVSVT LSEKEASPFD EYLANHTPLK EFLNSYNQCL KEIYQREALA  1140
DTESRNSSFM LKSRFYFEMQ LSKVYTNHIF EKFQIEVEGM FSCLSTRQVS IDGSIVTYIV  1200
KEHEVENVNE AKDYEVTLNT AVAEVLCACG LFNLEGFLCR HALCVLSQNS FEEIPPQYIL  1260
SRWRKDIHRS YVLDYGCNLI DTKNPVHRYD NLYKCAVKLV EEGRKSNERY KFTLEALGEI  1320
LNKVSLQDHN TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIT40383