PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40318
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 150aa    MW: 16995.8 Da    PI: 5.5835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40318genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.6e-182265148
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
              ++y+GVr+++ +gr++AeIr p++   ++r++lg+f+taeeAa a++ 
  OIT40318 22 TKYHGVRRRP-WGRYAAEIRNPNT---KQRHWLGTFDTAEEAALAYDI 65
              69********.**********933...5******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MENILPQLHV RNLGRRSSRH STKYHGVRRR PWGRYAAEIR NPNTKQRHWL GTFDTAEEAA  60
LAYDISSIAF CGIENARTNF VYPFMSFPSP SSQPPPSPPP PPPTPPPSTP ELEVVENEED  120
DNDNDDDESL VIASILQSFR HSNTLDKLVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.19e-27ERF family protein