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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT40212 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 335aa MW: 39024.5 Da PI: 6.3941 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 180 | 6.2e-56 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
+ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k+
OIT40212 7 VPPGFRFHPTDEELVDYYLRKKITSRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-KHD 105
69****************************.9***************954555442556**************************************.889 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129
l+g++ktLvfykgrap+g+k+dW+mheyrle
OIT40212 106 LIGMRKTLVFYKGRAPNGKKSDWIMHEYRLE 136
9****************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 335 aa Download sequence |
MNSFSHVPPG FRFHPTDEEL VDYYLRKKIT SRRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGKKSDWIM HEYRLETDPN GAPQEEGWVV CRVFKKRIAT MRKESEYESP IWYDHDQVSF 180 MPDMDSPKQQ HSHSGLTYHY PNYPCKKELD NLHYQIPPHH QQFLQLPLLE SPKFLPPPPC 240 SSMPVFAINV NNHVHQYGNN NNNISTNTNE LVGDDQVMDW RVLDKFVASQ LSQEEENDYS 300 NTLQAAADDS NLNKQEAATE NTSTASSSSQ IDLWK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G12260.1 | 1e-113 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT40212 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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