PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT40064

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 767aa MW: 86031 Da PI: 4.7848

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT40064	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.8	4.4e-49	4	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtd el+++yLk+k+ gkkl++ e+i+e++iyk+ PwdLp k ++k+++ ewyfF++r++kya+g r nrat++gyWk+tgkd++++ +++ OIT40064 4 LPPGFRFHPTDVELIMYYLKRKIMGKKLHF-EAITELNIYKFSPWDLPdKcCYKSKDLEWYFFCPRERKYASGARMNRATETGYWKTTGKDRSITY-DEKI 102 79************************99.89***********6545666777***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg ktLvf++g+ p+g++tdWv+hey++ OIT40064 103 VGSVKTLVFHQGHPPRGQRTDWVIHEYKF 131 ***************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence
MARLPPGFRF HPTDVELIMY YLKRKIMGKK LHFEAITELN IYKFSPWDLP DKCCYKSKDL 60 EWYFFCPRER KYASGARMNR ATETGYWKTT GKDRSITYDE KIVGSVKTLV FHQGHPPRGQ 120 RTDWVIHEYK FEDKGLADAG FAQDSYVLCK VFQKSGPGPK NGAQYGAPFK EADWEDDEIP 180 AEPCTSDVLC APSGRPDNKN YSIETSMVNP GSTSGWPSSQ PSLSLSSIQR MPLDEPNIEV 240 PGDPRPSNVS PINWMPSDKL DDEGVTGESN PSNIFSALPV LPEKQSLIDT SMINRGPGPS 300 NARLCTNKMP LDEQDDEIIG LLAHFIEDTT LLSAGNDNNQ NLENFNQDMN ALSDPFTDGN 360 DIFDGLGNIE NWEGMGQSRS DLSASWRANY SLNPMILLED AAYMELNDLE TPLDHSAGTI 420 ETGRLALSNF CAPYKSNLDV QQFCYGNNSL GINQDFCENQ LPMLPESYTQ QVNHSDMVYN 480 YYQNNVSQGY NASTNFSFSS YKQPEENSRL AAQNMERGVQ QRKFCLSIFA LCGGSLILVK 540 AEVILGIDGC TNDALSVILG DLFYSSIFAL CGGSFIFVKA EVTLKIDGCT DEALSVILGG 600 LSCVFTCQSN VVKAGISKEV LEPLRFGFSL ALCFSHLKKL WYNLFWEFYE FIFLKIVLNQ 660 LQVIIQVVCC FIFIPILAIS LLCGALSLMT HWQLSVAGGR KCITIFVFNL IYLSGFQLSY 720 LNLLIRSVVE RHSSTKSQPF KLNVFLSVYA YSIFCWCCTL MLVYFCL

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence

MARLPPGFRF HPTDVELIMY YLKRKIMGKK LHFEAITELN IYKFSPWDLP DKCCYKSKDL  60
EWYFFCPRER KYASGARMNR ATETGYWKTT GKDRSITYDE KIVGSVKTLV FHQGHPPRGQ  120
RTDWVIHEYK FEDKGLADAG FAQDSYVLCK VFQKSGPGPK NGAQYGAPFK EADWEDDEIP  180
AEPCTSDVLC APSGRPDNKN YSIETSMVNP GSTSGWPSSQ PSLSLSSIQR MPLDEPNIEV  240
PGDPRPSNVS PINWMPSDKL DDEGVTGESN PSNIFSALPV LPEKQSLIDT SMINRGPGPS  300
NARLCTNKMP LDEQDDEIIG LLAHFIEDTT LLSAGNDNNQ NLENFNQDMN ALSDPFTDGN  360
DIFDGLGNIE NWEGMGQSRS DLSASWRANY SLNPMILLED AAYMELNDLE TPLDHSAGTI  420
ETGRLALSNF CAPYKSNLDV QQFCYGNNSL GINQDFCENQ LPMLPESYTQ QVNHSDMVYN  480
YYQNNVSQGY NASTNFSFSS YKQPEENSRL AAQNMERGVQ QRKFCLSIFA LCGGSLILVK  540
AEVILGIDGC TNDALSVILG DLFYSSIFAL CGGSFIFVKA EVTLKIDGCT DEALSVILGG  600
LSCVFTCQSN VVKAGISKEV LEPLRFGFSL ALCFSHLKKL WYNLFWEFYE FIFLKIVLNQ  660
LQVIIQVVCC FIFIPILAIS LLCGALSLMT HWQLSVAGGR KCITIFVFNL IYLSGFQLSY  720
LNLLIRSVVE RHSSTKSQPF KLNVFLSVYA YSIFCWCCTL MLVYFCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	2e-81	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT40064