PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT39905 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 257aa MW: 28569.6 Da PI: 7.4111 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.8 | 5.4e-33 | 52 | 109 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 ++vrY+eClkNhA+ +GghavDGCg+fmp+ geegt++alkCaAC+CHRnFHR+eve e OIT39905 52 SGVRYRECLKNHAVGIGGHAVDGCGDFMPA-GEEGTMDALKCAACNCHRNFHRKEVEGE 109 679**************************9.999*********************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEFDEEHEEQ EEEIGNIHQI SSAAATINFQ TQGNNSVRGG VEEGVSTTVR KSGVRYRECL 60 KNHAVGIGGH AVDGCGDFMP AGEEGTMDAL KCAACNCHRN FHRKEVEGEV FHHTPPPHLT 120 HHHPQPHHSH HPQFSPYTSY RTPHHPSGYL HVNPPPHQRP LALPSTSRED EDMSNPSSSG 180 GGGGGSGGVG GSSRKRFRTK FTADQKDKML AFAERLGWRM QKQDEALVQQ FCAETNVQRH 240 VFKVWMHNNK HTLGKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 5e-68 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT39905 |