PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39875
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 281aa    MW: 31260.7 Da    PI: 6.9346
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39875genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.7e-17191226134
      GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
               C++Cgt++  Tp++Rrgp g++tLCnaCGl ++ kg
  OIT39875 191 CVHCGTSSkdTPMMRRGPAGPRTLCNACGLTWANKG 226
               *********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MNSHIQALNV DNHFSAGGEE VSAGSDKAVD DFPIGYEGEV GGVKVTMPHN YTVYSASDHV  60
AFQNGEANSN QLTLSFRGQV YVFDGVTTHK VQSVFQLLGG YEYFPGMQTV GLSSSNQEDS  120
VDYPLHCADL KRLESLIRFR EKRKRRCYGK KIRYDVRQEV AFRMQRKNGQ FARKGSGEPK  180
QDDNPPEETW CVHCGTSSKD TPMMRRGPAG PRTLCNACGL TWANKGIMRN LYTASYDNTL  240
LTELEDEDHS NSDYGAPPRS LSYQVSSSAS DSSVLAARQR L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.21e-57GATA family protein