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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT39748 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 28349.7 Da PI: 5.6131 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.6 | 6e-15 | 72 | 124 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iNs ++ Lr+llP + ++kKls ++ ++ +YI +Lq OIT39748 72 KKLNHNASERDRRKKINSLYSSLRSLLPAsD---HAKKLSIPSTISRVLKYIPELQ 124 6789*************************66...9999***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MLAISSSPMF SNNFGWLLED PISHELNMTS AETSSDSVVA LHSSSHTRLL EHSDSKKFDQ 60 INNDDQPDHM VKKLNHNASE RDRRKKINSL YSSLRSLLPA SDHAKKLSIP STISRVLKYI 120 PELQNEVERL IEKKEELTSR TISNKENSAD FNKQKRRGGK DSSSLVISAS EVGDKEVVIQ 180 ISALKINKGS LAEAVSDLED EGLSLLNSSC FETFEDRVFY TMHFQVHGTM VVELDTLRDK 240 LSSYFEKEDE L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 4e-48 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT39748 |