PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT39401 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Trihelix | ||||||||
Protein Properties | Length: 254aa MW: 28934.5 Da PI: 9.9824 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48.9 | 1.8e-15 | 19 | 102 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Liea ++ rl+rg+l++++W+ev++ + r+ g+ +r+ +qCk++++ l+k+yk +k+ ++ s++p++++l+ OIT39401 19 CWSEGATETLIEAWGDRYIRLNRGNLRQKDWKEVADTVnsRQNGVkpQRTDVQCKNRIDTLKKKYKLEKTKSSP------SKWPFYNRLD 102 7*************************************88777776689******************9998886......58*****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MECQTAAPTR PHAGGREDCW SEGATETLIE AWGDRYIRLN RGNLRQKDWK EVADTVNSRQ 60 NGVKPQRTDV QCKNRIDTLK KKYKLEKTKS SPSKWPFYNR LDYLIGTNNV STSPCNRILT 120 AAITLTVKSN SNPNPNFGAV NYSGSSSRIN SSGSNNSSHD DLPFGSGGRK NKMEYVGLAE 180 ETTAYKELAR AILRFGEIYE RIESTKQQQM VELEKQRMEF TKELEVQRMN MFMETQLQIE 240 RAKRPARHPT STGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05550.1 | 6e-63 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT39401 |