PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38193
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 334aa    MW: 36205.2 Da    PI: 6.0581
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38193genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer51.91.8e-162578458
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 ++Y eC +N      ++ +DGC  f p  g  g+++al+C  CgC RnFHRr  +
     OIT38193 25 AVYGECIRNRLTGAMTYDTDGCLAFAPG-GPPGSTQALRCQTCGCSRNFHRRLDT 78
                 58*************************8.8889******************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MANNNMLRAN QAARANNNRP MISPAVYGEC IRNRLTGAMT YDTDGCLAFA PGGPPGSTQA  60
LRCQTCGCSR NFHRRLDTNN LPPPAASHQI YDDTRLVYSP PVFTAPSSTI IPPPSPPPQR  120
TQPDAPAADV NVESSNANAN SLAESFRVTA VESISTGSVN LQCVHSPVSA TRGSVKGKEV  180
MDAEIAKTFA ALPPLPPRQQ RSKSPAVSGK KKSTITSSDV VSEIMKDKVW LLTEELEWLN  240
MKNKEEEDKK NNEQLEETNS NVSGRNPIFD HTIERSMNNR AEVLKTMNHQ FLVIATTLTA  300
RRELGDQSPC SAGTSNTESE NDKSSSDSDS DSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.19e-12ZF-HD family protein