PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37851
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 327aa    MW: 35824.2 Da    PI: 7.9613
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37851genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1760109255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  OIT37851  60 RYRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAIILYG 109
               59****999.**********954...5999*******************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MNTSPNAQHL IPSQTVPIPS EEKTTTISSA TVSDTTSTST SSSSNKKGKG KGGPDNNKFR  60
YRGVRQRSWG KWVAEIREPR KRTRRWLGTF ATAEDAARAY DRAAIILYGS RAQLNLQPST  120
GNNSSSSSQS FKKLSSSSST QTLRPLLPRP SGFGFTSFSS QNTAPPVSNS VGAACGYVPY  180
GFFPAVQYSQ QLVQPHQQQQ QQYAICDGYG PEADNLAHEV GTTCSYSSPN PNPSHIQEKP  240
PKQEDQSSHH EYQNQQQNSL YDETINPFVG SSMSFCSTQT MAAPVVSDPV AVMGGPGSPV  300
FWPTNDDSNY PAVNFWDYSY DSFMFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-27ERF family protein