PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37457
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 346aa    MW: 40317 Da    PI: 4.3892
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37457genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.16.3e-15105190286
  trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
               W+++e  +L+e+  e+  +l+r++l++ +W+ev++k+ +  g+e+s ++C++ ++ l+k+ykk+ + ++k   + +s++p+f++++
  OIT37457 105 WSEEESFVLLEVWGERYLELGRRSLRAEDWAEVAEKVtEMIGVEKSEIECRNQLDVLKKKYKKEITKMEKTGGGFHSKWPFFKKMD 190
               *************************************5568**********************99999988899999********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MDDSDDETRY PSRPNSIYSS SLRSRRSIRN PSSYSRNTHY YGYNNNEFQY DDDDESDEEE  60
AEQEFSSGEN GYHSFQKRRK LETLVSNYEF APRSGSSHSS KGGMWSEEES FVLLEVWGER  120
YLELGRRSLR AEDWAEVAEK VTEMIGVEKS EIECRNQLDV LKKKYKKEIT KMEKTGGGFH  180
SKWPFFKKMD MLMNLRMKGH CGLGCGLDSG EYVFMDPRMY LDRSNVLDEM RDSPAGSDAD  240
NDEEEEEEEQ GSGGWEGDNE SAKLLADSIQ RFGLIYEKIE NSKRKQMMEL EKMRRDFQRE  300
LELQKKQIVE RAQEEIAKIR DNDDDEDNGD EDGEETDNIS GEKLRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-77Trihelix family protein