PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT37121

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

C2H2

Protein Properties

Length: 155aa MW: 17432.5 Da PI: 6.6585

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT37121	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.2e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H OIT37121 74 YTCTFCRREFRSAQALGGHMNVH 96 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MAAELWILSQ EEQKQQKSPQ QPPLDPSSAA GCWMWNTKQS SRITVQDDDD SWEVRAFEED 60 TGNAMGTTWP PRSYTCTFCR REFRSAQALG GHMNVHRRDR ARLHQAPPLA SYSNHTSSPN 120 ANSTLLIPTQ EFVTNGGLCL YTPCLTLMVL PSIPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17810.1	6e-37	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIT37121