PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37074
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 412aa    MW: 44831.8 Da    PI: 8.1379
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37074genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.7e-053023401255
               HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  OIT37074 302 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 340
               7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MEPANLHHHH QQYHQLQFQD QLPLGISPNS SSSNSSYGDA TNTTHTWTPC TILNSAGTCL  60
SSYSSGAINT TNSSDPLLLR QQQQQQSGTN LISMTQDLGF HWANNSVSSQ LVKQENSLDS  120
YPRFTQMLKS PSNIEERELS DMNAKLLFGT LSNSGCQMIN TGLQLYPGDH NLLYSSNSST  180
TTNNRGKFSQ IYPTINVSNL NTINQASYLA NSSSLDMNLQ PLDLVNSSRY GGSFSQPYGL  240
TNHFQHSSSE SPVDSSSSIS AFSNGVPEAK RTSNILEPKA PQNAPKKSRV DSRASCPPFK  300
VRKEKLGDRI AALQQLVAPF GKTDTASVLM EAIGYIKFLQ NQVETLSVPY MKSSRNKTSR  360
SLHGGGGEMN GSEEVKRDLR SRGLCLVPLS CLTYMTDGGG GVWPPPNFAG GT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-64bHLH family protein