PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT37060 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | GATA | ||||||||
Protein Properties | Length: 180aa MW: 19854.2 Da PI: 10.0692 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.3 | 2.5e-19 | 41 | 75 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ CgttkTplWR gp g+k+LCnaCG++ rkk++ OIT37060 41 CVDCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 75 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MVDFSDKVSD HEVAENEEMS GQNQTPERVL SENSESQLKT CVDCGTTKTP LWRGGPAGPK 60 SLCNACGIRS RKKRRALLGL NKEDKKPKKS MGSSNKSISQ HHNQNNQSSN SSTSSSEEST 120 TSNAVKNNKC IPFKKRLLHF GREVALQRPR SSSTQHRRKL GEEEQAAFLL MALSCGSVYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 9e-36 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT37060 |