PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36932
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 268aa    MW: 30902.6 Da    PI: 6.1412
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36932genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.7e-08155195954
               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  OIT36932 155 ARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 195
               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDINHHLKLT TSTWQPTMAN IDDHIFDDHQ QQQQQQQRRE FPFDHNPIWP SFPLQNPHHH  60
LPTFSSELQQ QQQQRQQQVP FDHVVNNHVQ TLIEDHHDQE PEDDEEEEEE EELGAMKEMM  120
FKIAAMQPVD IDPATIRKPK RRNVRISNDP QSVAARLRRE RISEKIRILQ RLVPGGTKMD  180
TASMLDEAIR YVKFLKRQIR QLQSSNHHLP PSQVPVVPCP STENWANIIT PTKALILGSS  240
SITTTTIATT ATFVGNSASD PTYEVIGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156161RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.12e-45bHLH family protein