PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36893

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 374aa MW: 42631 Da PI: 8.3052

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36893	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.3e-52	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 + pGfrFhPtdeelv +yL++k+++k l++ e ik++diyk++PwdLpk ++ +e+ewyfF++rd+ky++++r+nr++ +g+Wkatg+d++++s+ +++ + OIT36893 16 MLPGFRFHPTDEELVGFYLRRKIQHKALSI-ELIKQLDIYKFDPWDLPKLATIGEREWYFFCPRDRKYRNSTRPNRVIGAGFWKATGTDRPIYSSeGSKCI 115 579*************************.89***********8888899************************************956677 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkk+Lvfykgra kg+ktdW+mhe+rl OIT36893 116 GLKKSLVFYKGRAAKGTKTDWMMHEFRL 143 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MMEERNETDG KIDEMMLPGF RFHPTDEELV GFYLRRKIQH KALSIELIKQ LDIYKFDPWD 60 LPKLATIGER EWYFFCPRDR KYRNSTRPNR VIGAGFWKAT GTDRPIYSSE GSKCIGLKKS 120 LVFYKGRAAK GTKTDWMMHE FRLPSITDST TPKRFLDKNM LPNDSWAICR IFKKANSNAH 180 RALSYSWVSP QISSNTTPHF QTSNHFTPNE MSFIAKSASS AIQFSNDLQN SSMASFSPID 240 LPPYRTINPM TTSHSHPQQI SISNHDSTTS YTLSNSYTNL NIDASSLLLN MSSSILGDYN 300 NFSITLPENQ IQEAGNLVKE LPNVNVDHMQ EQWGNVRSVI GFPVNADIDA WNKSKLLWDS 360 SPCPSEMSTS YSTN

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MMEERNETDG KIDEMMLPGF RFHPTDEELV GFYLRRKIQH KALSIELIKQ LDIYKFDPWD  60
LPKLATIGER EWYFFCPRDR KYRNSTRPNR VIGAGFWKAT GTDRPIYSSE GSKCIGLKKS  120
LVFYKGRAAK GTKTDWMMHE FRLPSITDST TPKRFLDKNM LPNDSWAICR IFKKANSNAH  180
RALSYSWVSP QISSNTTPHF QTSNHFTPNE MSFIAKSASS AIQFSNDLQN SSMASFSPID  240
LPPYRTINPM TTSHSHPQQI SISNHDSTTS YTLSNSYTNL NIDASSLLLN MSSSILGDYN  300
NFSITLPENQ IQEAGNLVKE LPNVNVDHMQ EQWGNVRSVI GFPVNADIDA WNKSKLLWDS  360
SPCPSEMSTS YSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-105	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT36893