PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT36866 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YC | ||||||||
Protein Properties | Length: 257aa MW: 28364.1 Da PI: 6.3023 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.6 | 2.4e-55 | 79 | 182 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdflvdivpr OIT36866 79 QLQTFWANQyqeIEHVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 179 89******99999**************************************************************************************** PP NF-YC 99 del 101 ++l OIT36866 180 EDL 182 987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MDHHGNGQPP GIGVVTSSAP IYGAPYQANQ MAGPSPAVSA GAIQSPQTAG LSASSAQMAQ 60 HQLAYQHIHQ QQQQQLQQQL QTFWANQYQE IEHVTDFKNH SLPLARIKKI MKADEDVRMI 120 SAEAPVVFAR ACEMFILELT LRAWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE 180 DLKDEVLASI PRGTLPVGGP TEGLPFYYGM PPQSAPPVGA SGMYMGKPVD QALYAQQPRP 240 YMAQPIWPQQ QQPPSDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 158 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 4e-81 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT36866 |