PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36619
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 308aa    MW: 34666.6 Da    PI: 8.2421
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36619genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.91.2e-3397154260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vrYkeClkNhAas+Ggh++DGCgEfmps geegt++ lkCaAC+CHRnFHR+e+e+e
     OIT36619  97 SSVRYKECLKNHAASMGGHVLDGCGEFMPS-GEEGTPEYLKCAACDCHRNFHRKETEDE 154
                  579**************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEHTGREKDM GMPNSIGLNH QQESTPFAAA KLPTAPIVSS LPDRTRNEQI SYGNTIFSPN  60
QTLDHQHNLT QNSDPDPTVI AAQIRQQSTT SASDRNSSVR YKECLKNHAA SMGGHVLDGC  120
GEFMPSGEEG TPEYLKCAAC DCHRNFHRKE TEDELQTAGV YRNNSNSHRV HTQTPPSLPA  180
PPQQQHHHKY SHNYSRGPTM PPVMMNFGGN TGVPAESSSE DLNMFHSNAG GQGVIQPCAF  240
SASKKRFRTK FSQQQKEKMQ EFAEKLEWRI QKQDEQEVQQ FCNEVGVKRQ VFKVFMHNCK  300
QAIKRKQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.15e-68ZF-HD family protein