PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT36340 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 380aa MW: 44045.5 Da PI: 8.4312 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.5 | 5.7e-06 | 73 | 93 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg sF + +Lk+H+++H OIT36340 73 CEECGVSFQKPAHLKQHMQSH 93 *******************99 PP | |||||||
2 | zf-C2H2 | 17.9 | 8.4e-06 | 99 | 123 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ dC s++rk++L+rH+ H OIT36340 99 FVCHidDCQSSYRRKDHLTRHLLQH 123 89*******************9887 PP | |||||||
3 | zf-C2H2 | 14.3 | 0.00012 | 128 | 153 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp C++ Fs + n++rH + H OIT36340 128 FECPvdGCKRAFSIQGNMTRHVKEmH 153 89********************9988 PP | |||||||
4 | zf-C2H2 | 19.2 | 3.3e-06 | 167 | 191 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk+F+ s Lk+H +H OIT36340 167 YVCSepGCGKVFKFASKLKKHEDSH 191 89*******************9888 PP | |||||||
5 | zf-C2H2 | 16.2 | 3.1e-05 | 258 | 282 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ +C +Fs+ksnL +H + H OIT36340 258 KCEfqHCQHTFSTKSNLIQHVKAvH 282 79999***************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MAAKILGEMG EEKREVIFRD IRRYYCEFCG ICRSKKSLIS SHILSNHHDE MERRKDEANE 60 DVKKKEGPKI NICEECGVSF QKPAHLKQHM QSHSLERPFV CHIDDCQSSY RRKDHLTRHL 120 LQHQGKLFEC PVDGCKRAFS IQGNMTRHVK EMHDQRASPE ANLPKQYVCS EPGCGKVFKF 180 ASKLKKHEDS HVKLEKMEAL CLEPGCMKHF TNEKCLKEHI ESCHQHIVCE ICGTKQLKKN 240 IKRHLQTHEE ESTSERIKCE FQHCQHTFST KSNLIQHVKA VHLGDKPFSC GIAGCGMKFA 300 FKHVRDRHEK SGCHVYTPGD FVEADEQFRS RPRGGRKRKL PVFEAIMRKR ITPPCGTDPV 360 FYQGSEYLSW LLSAESDEEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 331 | 339 | RPRGGRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-133 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT36340 |