PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36327

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 349aa MW: 39281.8 Da PI: 7.2134

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36327	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 lppGfrF Ptdeel+v+yL++kv+g++++l +i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++vg OIT36327 14 LPPGFRFYPTDEELLVQYLCRKVAGHDFSL-PIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT-EGRKVG 112 79************************99.88***********7777799*******************************9999.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kk Lvfy g+apkg+kt+W+mheyrl OIT36327 113 IKKALVFYVGKAPKGTKTNWIMHEYRL 139 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGVQETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FSLPIIAEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLS ESPRKNGSSR LDEWVLCRIY KKNSGGQKPD ISGLNSKEIS 180 HGSSSSSSSQ FDDMLESLPE IEDRYFSLPR MNSLRNLQQD DKLNLQHLGS GNFDWAILAG 240 FNSFPELGTG NQAPAPGSQS QLHLNNQNSN NNLNLNEFFA HPTQLNFHGD VKFEGGVDEE 300 VESGIRAQRI NNSGFFQENS TGLQAYTNSV PDPFGIRYPT QTVNMGYSR

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGVQETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FSLPIIAEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLS ESPRKNGSSR LDEWVLCRIY KKNSGGQKPD ISGLNSKEIS  180
HGSSSSSSSQ FDDMLESLPE IEDRYFSLPR MNSLRNLQQD DKLNLQHLGS GNFDWAILAG  240
FNSFPELGTG NQAPAPGSQS QLHLNNQNSN NNLNLNEFFA HPTQLNFHGD VKFEGGVDEE  300
VESGIRAQRI NNSGFFQENS TGLQAYTNSV PDPFGIRYPT QTVNMGYSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-129	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT36327